Protocols & Guidelines

ORGAN CIRCULATORY SUPPORT LOLLY REGIMEN Description Short Description The Organ Circulatory Support Lolly Regimen is a gentle, daily natural support system using five specialized herbal lollies to…

Abstract: Diphtheria is a vaccine-preventable disease, yet immunization can wane over time to non-protective levels. We have developed a low-cost, miniaturized electroanalytical biosensor to…

Real time non-invasive Brain Computer Interfaces have a significant progressive role in restoring or maintaining a quality life for medically challenged people. This manuscript provides a…

Open, MIT-licensed food & nutrition science research skills for Claude Code, Codex, and MiniMax Agent — multi-agent literature/systematic review, journal-aware writing, peer review, and figures,…

—Myoelectric prostheses have seen increased application in clinical practice and research, due to their potential for good functionality and versatility. Yet, myoelectric prostheses still suffer…

239 evaluated academic Claude/agent skills across 17 research domains (bioinformatics, data science, clinical, social-science methods, Turkish academia & more). Executable eval per skill,…

Stream live EEG brain state (focus, calm, attention) from any EEG device into Claude and any MCP client — a real Model Context Protocol server + brain-computer interface toolkit.

Original Research Paper BILATERAL INGUINAL HERNIA CLINICAL PROFILE AND MANAGEMENT IN RURAL TERTIARY CARE CENTRE- AN PROSPECTIVE INTERVENTIONAL STUDY 1 Dr Rajiv Sonarkar, 2 Dr Avinash Babruwan…

A Python library to assist with scripting bio-automation protocols

BioMCP: Biomedical Model Context Protocol

Forensic biopharma catalyst auditor — 10-tool MCP server that cross-references CT.gov, SEC EDGAR, openFDA, PubMed & Yahoo Finance to return a single deterministic verdict (CLEAN / BEAR_SIGNAL /…

VWorks protocols and other files for the Agilent NGS Workstations at the Genomics facility at SciLifeLab.

Background. Application of evidence from landmark cardiology trials to individual patients requires comparing each patient against each trial's published inclusion and exclusion criteria, an…

Full CBCT + 2D radiograph viewer from a board-certified oral and maxillofacial radiologist: 8 reading modes, local-first, open source. Also the first viewer AI agents can drive natively (MCP).

Search and query CDC public health data — mortality, vaccinations, surveillance, behavioral risk (Socrata SODA API) via MCP. STDIO or Streamable HTTP.

MCP server for spatial transcriptomics analysis through natural language interfaces.

Chia Health MCP Server — Patient workflow integration for a licensed US telehealth platform. Browse GLP-1 medications (semaglutide, tirzepatide), peptide therapies (sermorelin, NAD+, glutathione),…

Clinical Trial Risk Tool for analysing clinical trial protocols using natural language processing and assessing the risk of ending uninformatively, developed by Fast Data Science

[Frontiers in Comp. Neuro.] Deep Attention Super-Resolution of Brain Magnetic Resonance Images Acquired Under Clinical Protocols

Search ClinicalTrials.gov trials, retrieve study details and results, and match patients to eligible trials via MCP. STDIO or Streamable HTTP.

An advanced multi-agent system for clinical decision support, enabling deep phenotypic prediction by integrating hierarchical multi-modal deviation maps and non-tabular electronic health records.

Templates and functions for opentrons robots. Functional protocols for RT-qPCR covid19 tests.

Use machine learning to find patterns of similar eligibility protocol criteria for clinical trials

Phoenix CTMS - the ultimative CTMS/PRS/CDMS.

Official repository for the Deep Docking protocol

Public registry for local-first wellness MCP connectors: wearables, recovery, training, nutrition and the Delx Wellness Hermes profile.

This paper presents a novel approach to developing a laboratory testbed for cybersecurity testing distribution substations, focusing on the GOOSE communication protocol specified by IEC 61850. The…

Automation can improve the efficiency, reproducibility, and affordability of clinical immunodiagnostics, yet most ELISA automation platforms are bulky and expensive and remain poorly suited to…

In our research group, we currently work on the software, firmware, and hardware development related to digital microfluidic biochips. Digital microfluidic biochips allow the execution of biological…

Exploratory DICOM Protocol Buffer Representations and Generator

Python script to send folder of DICOM files to a PACS through the DICOM protocol

Pharmaceutical R&D Pipeline Intelligence MCP Server — Clinical trials, FDA/EMA approvals, safety data. Questions? Start here!

Working repository to turn the COBIDAS guidelines to report methods and results in neuroimaging into a user friendly checklist

The emergence of new and adaptive microbial strains has intensified the need for advanced pathogen detection methods. Over the past three decades, 33 novel pathogens, including severe acute…

Explainable machine learning models for Type-2 diabetes risk prediction with focus on interpretability and clinical decision support.

The WFO RAG agent and LLM integration introduces a Large Language Model (LLM)-based search implementation in the Workflow Orchestrator (WFO). This incubator successfully evaluates and integrates a…

GSoC 2017 Project with Shogun - Patient Monitoring and Decision Support using Health Data

This repository contains the software part of the design files for the article "Open-source implementation of polarisation-resolved single-shot differential phase contrast microscopy ( pDPC ) on a…

Bridging the gap between theory and bedside practice through open-access, physiologically-weighted, evidence based, decision support tools for anesthesia and intensive care.

Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results.

Özet Dermatofit enfeksiyonlarında etkenin doğru ve hızlı tanımlanması hasta yönetimi ve uygun tedavilerin planlanması için anahtar roller üstlenir. Direkt inceleme, Wood lambası, mikroskopi, kültür,…

AI Agent wrappers for Life Sciences APIs (Open Targets, ChEMBL, UniProt). Accelerating drug discovery with Model Context Protocol (MCP) and FastMCP.

🏥 MCP Server with 121 validated medical calculators for AI agents. DDD architecture, evidence-based formulas with PMID citations. Supports Claude, GPT, and other LLM integrations.

Hundreds of agent skills for medical research, including protocol design, data analysis, evidence insights, and academic writing.

Agent Skills for medical research — literature search, reporting-guideline & citation checks, statistics, publication figures, submission. Works with Claude Code, Codex, Cursor & GitHub Copilot.…

Microscopy is a critical experimental tool in life sciences. However, when attempting to reproduce or scale-up a published method, researchers often meet difficulties in implementing specific…

Convert NCCN cancer clinical practice guideline PDFs into executable Claude Code skills with semantic chunking, parallel LLM conversion, and anti-hallucination citation enforcement for…

A baby incubator implements the internet of things (IoT) with an architectural design combining several scientific fields, such as networks, software, and hardware. Furthermore, this research…

An MCP (Model Context Protocol) server that connects AI assistants to Nightscout — the open-source CGM remote monitoring platform for Type 1 Diabetes management. Ready to connect to Claude and…

NOMAD CAMELS (short: CAMELS) is a configurable, open-source measurement software that records fully self-describing experimental data. It has its origins in the field of experimental physics where a…

A remote MCP server for personal nutrition tracking — log meals, track macros, and review nutrition history through conversation.

Reverse-engineered BLE protocol reference for the Wellue O2Ring-S (T8520), with a working Python reference implementation.

The published reference design and build documentation for the OpenAPS automated insulin delivery approach.

First open-source OpenEvidence MCP server: browser-session medical research tools for Codex, Claude Code, and MCP clients

Title : Optimizing Care for Women Experiencing Pregnancy Loss: Insights from a Systematic Review and Meta-Analysis This systematic review and meta-analysis was developed to comprehensively assess…

A Comet-based, best practices proteomics pipeline.

Free, open-source, self-hosted peptide & GLP-1 tracker. Single Docker container, installable PWA (offline, dark/light). Reconstitution & draw-volume calculator, dose logging, titration…

Background: Blood stream infections (BSI) lead to significant morbidity and mortality, more so in immunocompromised group of patients like cancer patients. BCID 2 was evaluated for diagnosis of BSI…

This study aims to evaluate the performance of two commercial temperature sensors integrated into a 3D-printed fingertip for hand prostheses. The performance of the two selected sensors (NTC and IR)…

The PhageBox is a digital microfluidics device that integrates temperature and magnetic control modules at the hardware level. This repository contains the embedded software which contains a finite…