Allmine
importedsoftware/allmine
AllMine, a flexible pipeline for Allele Mining. Develloped at INRA's GAFL unit :
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- www6.paca.inra.fr/gafl/
- Repository
- github.com/tbersez/Allmine
- Documentation
- unknown
- Tags
- allele-mining · bioinformatics-pipeline · genomics · ngs-pipeline · python · singularity · slurm · snakemake
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- snakemake-ont-bacterial-variantsbioinformatics-pipeline · singularity · snakemake
A Snakemake workflow for the identification of variants in bacterial genomes using nanopore long-read sequencing.
- snipgeniegenomics · ngs-pipeline
command line and desktop tool for microbial variant calling
- dicom-containerssingularity
singularity and Docker containers to easily get started with common dicom tools
- CSBB-Shinyngs-pipeline
Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researchers from wet and dry lab to perform downstream Bioinformatics…
- FooDMengs-pipeline
A reproducible and scalable snakemake workflow for the analysis of DNA metabarcoding experiments, with a special focus on food and feed samples.
- albatradisbioinformatics-pipeline · genomics
Comparative TraDIS analysis
- api.github.com/repos/tbersez/Allmineretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2019-06-13, 4 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/39.json→ .entries["allmine"]
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