BakingTray

Category

Software & Systems

Subcategory

unknown

License

LGPL-3.0(osi)

Status

active

Maturity

deployed

Organization

SWC-Advanced-Microscopy

Country

unknown

Homepage

bakingtray.mouse.vision/

Repository

github.com/SWC-Advanced-Microscopy/BakingTray

Documentation

unknown

Tags

2-photon · anatomy · imaging · matlab · microscopy · neuroanatomy · neuroscience · scanimage

Regulatory

unknown

• raacampbell
• vollrathf

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

• cellfinderimaging · microscopy · neuroanatomy · neuroscience

  Automated 3D cell detection in very large images

• brainregmicroscopy · neuroanatomy · neuroscience

  Automated 3D brain registration with support for multiple species and atlases.

• StitchItanatomy · imaging · microscopy · neuroscience

  Stitching of large tiled datasets

• lifeneuroanatomy · neuroscience

  Please use the new version of LiFE: www.github.com/brain-life/encode

• luupelianatomy

  A serious game for teaching Latin bone names for freshman year veterinary medicine students.

• anonymize-slide-python3-guiimaging · microscopy

  Delete the label image to deidentify a whole-slide image (WSI) with an optional GUI

1. api.github.com/repos/SWC-Advanced-Microscopy/BakingTray
   retrieved 2026-08-05 · via github-api

   Machine-imported from GitHub search. Last push 2026-07-08, 18 stars, license reported as LGPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

/v1/entries/55.json→ .entries["bakingtray"]

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