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BaseVar2

imported

software/basevar2

This is the official development repository for BaseVar, which call variants for large-scale ultra low-depth(<1.0x) WGS data, especially for NIPT data and ancient DNA

Machine-generated from the listed sources and not yet reviewed by a human.

record
Category
Software & Systems
Subcategory
unknown
License
AGPL-3.0(osi)
Status
active
Maturity
deployed
Organization
unknown
Country
unknown
Homepage
www.cell.com/cell-genomics/fulltext/S2666-979X(24)00288-X
Repository
github.com/ShujiaHuang/BaseVar2
Documentation
unknown
Tags
basevar · bioinformatics · cfdna · low-coverage-sequencing · nipt · non-invasive-prenatal-test · variant-calling
Regulatory
unknown
built by · 1

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • basevarbasevar · bioinformatics · cfdna · nipt · non-invasive-prenatal-test

    This is the official development repository for BaseVar, which call variants for large-scale ultra low-pass (<1.0x) WGS data, especially for NIPT data

  • BaseVarClow-coverage-sequencing · variant-calling

    The repo was not under active development. Check out angsd toolkit for low depth data analyses.

  • hoobaribioinformatics · nipt

    Bayesian-based fetal genotyping using maternal cell-free DNA and parental sequencing data.

  • BALSAMICbioinformatics · variant-calling

    Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer

  • Bioinformaticsbioinformatics · variant-calling

    Bioinformatics N' Stuff

  • CalliNGS-NFbioinformatics · variant-calling

    GATK RNA-Seq Variant Calling in Nextflow

sources
  1. api.github.com/repos/ShujiaHuang/BaseVar2
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2026-07-30, 10 stars, license reported as AGPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/49.json→ .entries["basevar2"]

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