exllsm-circuit-reconstruction
importedsoftware/exllsm-circuit-reconstruction
Nextflow pipeline encapsulating workflows for analyzing expansion lattice light-sheet microscopy (ExLLSM) imagery
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- BSD-3-Clause(osi)
- Status
- active
- Maturity
- deployed
- Organization
- JaneliaSciComp
- Country
- unknown
- Homepage
- unknown
- Documentation
- unknown
- Tags
- image-processing · lightsheet · machine-learning · microscopy · neuroscience · nextflow-pipelines · pipeline · segmentation
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
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#ZVQ - Zebrafish Vascular Quantification - https://doi.org/10.1242/dev.199720
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Pipeline for processing spatially-resolved gene counts with spatial coordinates and image data. Designed for 10x Genomics Visium transcriptomics.
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Brain Extraction Tool in Python
- pytorch_connectomicsmicroscopy · neuroscience · segmentation
PyTorch Connectomics: segmentation toolbox for EM connectomics
- napari_latticelightsheet · microscopy
Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for data from the Zeiss lattice lightsheet microscope.
- apex-nfnextflow-pipelines
APEX: Automated Protein EXpression in E. coli
- api.github.com/repos/JaneliaSciComp/exllsm-circuit-reconstructionretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-04-15, 13 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.
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/v1/entries/13.json→ .entries["exllsm-circuit-reconstruction"]
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