gatk-sv
importedsoftware/gatk-sv
A structural variation pipeline for short-read sequencing
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- BSD-3-Clause(osi)
- Status
- active
- Maturity
- deployed
- Organization
- broadinstitute
- Country
- unknown
- Repository
- github.com/broadinstitute/gatk-sv
- Documentation
- unknown
- Tags
- bioinformatics · genomics · structural-variants · structural-variation
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- veritigbioinformatics · genomics · structural-variants
Sequence-level verification of structural variant assemblies against haplotype-resolved references
- dysgubioinformatics · genomics · structural-variation
Toolkit for calling structural variants using short or long reads
- truvaribioinformatics · genomics · structural-variation
Structural variant toolkit for VCFs
- arcsvgenomics · structural-variation
Complex structural variant detection from WGS data
- dupholdgenomics · structural-variation
don't get DUP'ed or DEL'ed by your putative SVs.
- smoovegenomics · structural-variation
structural variant calling and genotyping with existing tools, but, smoothly.
- api.github.com/repos/broadinstitute/gatk-svretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-05, 205 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/38.json→ .entries["gatk-sv"]
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