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mcmicro

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software/mcmicro

An end-to-end processing pipeline that transforms multi-channel whole-slide images into single-cell data.

Machine-generated from the listed sources and not yet reviewed by a human.

record
Category
Software & Systems
Subcategory
unknown
License
MIT(osi)
Status
active
Maturity
deployed
Organization
nf-core
Country
unknown
Homepage
nf-co.re/mcmicro
Repository
github.com/nf-core/mcmicro
Documentation
unknown
Tags
bioformats · image-analysis · image-processing · microscopy · multiplexed-imaging · nextflow · nf-core · ome-tiff
Regulatory
unknown
built by · 6

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

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    HistoJS: Web-Based Analytical Tool for Multiplexed Images. Limited Github Online Demo 👇

  • frcimage-analysis · image-processing · microscopy

    frc is a Python package for computing the Fourier Ring Correlation (FRC) of images using DIPlib

  • OADimage-analysis · image-processing · microscopy

    Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools and AI tools.

  • PSF_XYZ_Bead_Fitimage-analysis · image-processing · microscopy

    Automatic detection of beads for PSF measurement from Z-Stacks using python-bioformats.

  • diaproteomicsnextflow · nf-core

    Automated quantitative analysis of DIA proteomics mass spectrometry measurements.

sources
  1. api.github.com/repos/nf-core/mcmicro
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2026-07-27, 35 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/31.json→ .entries["mcmicro"]

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