merfish3d-analysis
importedsoftware/merfish3d-analysis
GPU accelerated post-processing for 2D or 3D imaging spatial transcriptomics data.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- BSD-3-Clause(osi)
- Status
- active
- Maturity
- deployed
- Organization
- QI2lab
- Country
- unknown
- Repository
- github.com/QI2lab/merfish3d-analysis
- Documentation
- unknown
- Tags
- gpu-acceleration · image-analysis · merfish · microscopy · spatial-data · spatial-transcriptomics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- SLATspatial-data · spatial-transcriptomics
Spatial-Linked Alignment Tool
- pyclesperanto_prototypegpu-acceleration · microscopy
GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data
- SPARKspatial-data
Spatially resolved transcriptomic analysis
- amfinderimage-analysis · microscopy
The Automatic Mycorrhiza Finder (AMFinder) allows for automatic computer vision-based identification and quantification of AM fungal colonisation and intraradical hyphal structures on ink-stained…
- cellfinderimage-analysis · microscopy
Automated 3D cell detection in very large images
- ExTrackimage-analysis · microscopy
ExTrack MLE for diffusive noisy single-particle tracks
- api.github.com/repos/QI2lab/merfish3d-analysisretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-05, 10 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/43.json→ .entries["merfish3d-analysis"]
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