pepper
importedsoftware/pepper
PEPPER-Margin-DeepVariant
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/kishwarshafin/pepper
- Documentation
- unknown
- Tags
- assembly-polishing · genome-variation · long-reads · nanopore · oxford-nanopore · pacbio-ccs · variant-calling · variants
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- kevlargenome-variation · variant-calling
Reference-free variant discovery in large eukaryotic genomes
- ClairS-TOlong-reads · nanopore
ClairS-TO - a deep-learning method for tumor-only somatic variant calling
- tiptoftlong-reads · nanopore
Predict plasmids from uncorrected long read data
- dv-triovariant-calling · variants
dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCFs) created by DeepVariants are then co_called together using…
- NAVIPvariant-calling · variants
Neighborhood-Aware Variant Impact Predictor
- long-read-pipelineslong-reads · variant-calling
Long read production pipelines
- api.github.com/repos/kishwarshafin/pepperretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2024-01-12, 259 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/57.json→ .entries["pepper"]
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