pgatk
importedsoftware/pgatk
Python tools for proteogenomics analysis toolkit
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- Apache-2.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- bigbio
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/bigbio/pgatk
- Documentation
- unknown
- Tags
- ensembl · mass-spectrometry · proteogenomics · proteogenomics-analysis-toolkit · proteomics · python · vcf
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- PepQuerymass-spectrometry · proteogenomics · proteomics
PepQuery: a targeted peptide search engine
- quantmsmass-spectrometry · proteogenomics · proteomics
Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.
- pyGenoensembl
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
- Customprodbjproteogenomics · proteomics
Customized protein database construction
- package-moPepGenproteogenomics · proteomics
Multi-Omics Peptide Generator
- PDVproteogenomics · proteomics
PDV: an integrative proteomics data viewer
- api.github.com/repos/bigbio/pgatkretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-05-23, 17 stars, license reported as Apache-2.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/2.json→ .entries["pgatk"]
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