pileup2var
importedsoftware/pileup2var
Variant calling from RNA based sequencing data.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/shunliubio/pileup2var
- Documentation
- unknown
- Tags
- base-conversion · mutation · rna · sequencing · variant-calling
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- rnavarrna · variant-calling
gatk4 RNA variant calling pipeline
- harpysequencing · variant-calling
Process linked-read data, from raw sequences to phased haplotypes, batteries included. Works with WGS too!
- nRexsequencing · variant-calling
nRex: Germline and somatic single-nucleotide, short indel and structural variant calling
- rdxonsequencing · variant-calling
Reference-free FASTQ filter for rare germline and somatic variants
- Clair3-RNArna
Clair3-RNA - a long-read small variant caller for RNA sequencing data
- xporerna
Identification of differential RNA modifications from nanopore direct RNA sequencing
- api.github.com/repos/shunliubio/pileup2varretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2022-08-20, 5 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/27.json→ .entries["pileup2var"]
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