pypdb
importedsoftware/pypdb
A Python API for the RCSB Protein Data Bank (PDB)
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/williamgilpin/pypdb
- Documentation
- unknown
- Tags
- blast · pdb · protein-data-bank · protein-sequences · protein-structure · proteins · proteomics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- biojavapdb · protein-data-bank · protein-sequences
:book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.
- plippdb · protein-structure
Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Schake, Bolz, et al. (2025), https://doi.org/10.1093/nar/gkaf361
- plassproteins · proteomics
sensitive and precise assembly of short sequencing reads
- EquiBindprotein-structure · proteins
EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein
- mmtf-proteomicsprotein-data-bank · proteomics
Methods for mapping proteomics data on 3D protein structure.
- vcf2protprotein-sequences · proteomics
Accelerate the generation of personalized proteomes from a Variant calling format (VCF) file and a reference proteome using graphical processing units (GPUs).
- api.github.com/repos/williamgilpin/pypdbretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-01, 336 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/60.json→ .entries["pypdb"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.