R-outbreak-info
importedsoftware/r-outbreak-info
R package to access the genomics and epidemiology data and Research Library metadata compiled and standardized on outbreak.info.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- outbreak-info
- Country
- unknown
- Repository
- github.com/outbreak-info/R-outbreak-info
- Documentation
- unknown
- Tags
- epidemiology · genomics · genomics-data · genomics-visualization · rstats · rstats-package
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- MicrobeTraceepidemiology · genomics · genomics-visualization
The Visualization Multitool for Molecular Epidemiology and Bioinformatics
- genomic_benchmarksgenomics · genomics-data
Benchmarks for classification of genomic sequences
- gbdrawgenomics · genomics-visualization
A genome diagram generator for microbes and organelles
- IGV-snapshot-automatorgenomics · genomics-visualization
Script to automatically create and run IGV snapshot batchscripts
- jigvgenomics · genomics-visualization
igv.js standalone page generator and automatic configuration to view bam/cram/vcf/bed. "working in under 1 minute"
- pyCirclizegenomics · genomics-visualization
Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)
- api.github.com/repos/outbreak-info/R-outbreak-inforetrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2023-03-05, 21 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/42.json→ .entries["r-outbreak-info"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.