scarf
importedsoftware/scarf
Memory-efficient single-cell analysis in Python. Stream RNA, ATAC, CITE-seq and multi-omics from local or remote Zarr stores, from laptop to atlas scale, with reusable fingerprinted results.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- BSD-3-Clause(osi)
- Status
- active
- Maturity
- deployed
- Organization
- NygenAnalytics
- Country
- unknown
- Homepage
- scarf.readthedocs.io
- Repository
- github.com/NygenAnalytics/scarf
- Documentation
- unknown
- Tags
- object-storage · provenance-tracking · scalable-computing · scrna-seq-analysis · single-cell · single-cell-multiomics · single-cell-omics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- COSGsingle-cell · single-cell-multiomics
Accurate and fast cell marker gene identification with COSG
- GLUEsingle-cell · single-cell-multiomics
Graph-linked unified embedding for single-cell multi-omics data integration
- pixelatorsingle-cell · single-cell-omics
A command-line tool and library to process and analyze sequencing data from Molecular Pixelation (MPX) and Proximity Network (PNA) assays.
- randomlysingle-cell · single-cell-omics
A Library for Denoising Single-Cell Data with Random Matrix Theory
- scClustVizscrna-seq-analysis · single-cell
Explore and share your scRNAseq clustering results
- scGNNscrna-seq-analysis · single-cell
scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks
- api.github.com/repos/NygenAnalytics/scarfretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-05, 119 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/62.json→ .entries["scarf"]
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