scgen
importedsoftware/scgen
Single cell perturbation prediction
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- theislab
- Country
- unknown
- Homepage
- scgen.readthedocs.io
- Repository
- github.com/theislab/scgen
- Documentation
- unknown
- Tags
- bioinformatics · deep-learning · generative-model · scrna-seq · single-cell · single-cell-genomics · transcriptomics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- scCustomizescrna-seq · single-cell · single-cell-genomics
R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
- scAlignscrna-seq · single-cell · single-cell-genomics
A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batches
- DRVIbioinformatics · single-cell · transcriptomics
Unsupervised Deep Disentangled Representation of Single-Cell Omics
- cirrocumulusbioinformatics · scrna-seq · single-cell
Bring your single-cell data to life
- dea_seuratbioinformatics · scrna-seq · single-cell
A Snakemake workflow and MrBiomics module for performing differential expression analyses (DEA) on (multimodal) sc/snRNA-seq data powered by the R package Seurat.
- mixscape_seuratbioinformatics · scrna-seq · single-cell
A Snakemake workflow and MrBiomics module for performing perturbation analyses of pooled (multimodal) CRISPR screens with sc/snRNA-seq read-out (scCRISPR-seq) powered by the R package Seurat's…
- api.github.com/repos/theislab/scgenretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2024-12-05, 352 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/47.json→ .entries["scgen"]
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