TMT_analysis_examples
importedsoftware/tmt-analysis-examples
Examples of TMT data analyses using R. Links to notebooks and repositories. Also a few spectral counting analyses.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Documentation
- unknown
- Tags
- ipynb · jupyter-notebook · mass-spectrometry · proteomics · proteomics-data · r · tmt · tmt-data-analyses
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- IRS_normalizationipynb · jupyter-notebook · mass-spectrometry · proteomics · proteomics-data
An exploration of internal reference scaling (IRS) normalization in isobaric tagging proteomics experiments.
- alphaquantmass-spectrometry · proteomics · tmt
An open-source Python package for accurate and sensitive peptide and protein quantification.
- quantmsmass-spectrometry · proteomics · tmt
Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.
- pmultiqcmass-spectrometry · proteomics · proteomics-data
A library for QC report based on MultiQC framework
- ursgalmass-spectrometry · proteomics · proteomics-data
Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis
- MSConnectproteomics · proteomics-data
MSConnect is a Web-based integrated plateform to combine data storage/backup, process and visualization of MS-based Proteomics data.
- api.github.com/repos/pwilmart/TMT_analysis_examplesretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2022-05-27, 22 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/37.json→ .entries["tmt-analysis-examples"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.