ColabMDA
importedtherapeutics/colabmda
User friendly molecular dynamics simulation combining Modeller, OpenMM and Google Colab: A complete guide
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Therapeutics
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/paulshamrat/ColabMDA
- Documentation
- unknown
- Tags
- cheminformatics · colab-tutorial · gromacs · ligand · mdanalysis · mdtraj · openmm · protein
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- lindemanncheminformatics · gromacs
lindemann is a python package to calculate the Lindemann index of a lammps trajectory
- ProLIFcheminformatics · mdanalysis
Interaction Fingerprints for protein-ligand complexes and more
- annapurnaligand
AnnapuRNA: a scoring function for predicting RNA-small molecule interactions.
- DockingPieligand
A Consensus Docking Plugin for PyMOL
- p2rankligand
P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
- AFPAPprotein
AlphaFold-based Protein Analysis Pipeline
- api.github.com/repos/paulshamrat/ColabMDAretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-06-16, 25 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/26.json→ .entries["colabmda"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.