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plasmidtron

imported

data/plasmidtron

Assembling the cause of phenotypes and genotypes from NGS data

Machine-generated from the listed sources and not yet reviewed by a human.

record
Category
Data & Standards
Subcategory
unknown
License
GPL-3.0(osi)
Status
dormant
Maturity
deployed
Organization
sanger-pathogens
Country
unknown
Homepage
sanger-pathogens.github.io/plasmidtron/
Repository
github.com/sanger-pathogens/plasmidtron
Documentation
unknown
Tags
bioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen · research
Regulatory
unknown
built by · 3

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • albatradisbioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen

    Comparative TraDIS analysis

  • gubbinsbioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen

    Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins

  • lodestonebioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen

    Mycobacterial pipeline

  • tiptoftbioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases

    Predict plasmids from uncorrected long read data

  • czid-webbioinformatics · bioinformatics-pipeline · genomics · global-health

    Infectious Disease Sequencing Platform

  • mitoquestbioinformatics · next-generation-sequencing

    Human Mitochondrial sequencing data Analysis Toolkit. Fetching information like variants, heteroplasmy/homoplasmy, etc. on mitochondrial genome from sequencing data

sources
  1. api.github.com/repos/sanger-pathogens/plasmidtron
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2020-06-11, 29 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/10.json→ .entries["plasmidtron"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.