ALLCools
importedsoftware/allcools
Toolkit for single-cell DNA methylation analysis.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Repository
- github.com/lhqing/ALLCools
- Documentation
- unknown
- Tags
- allc-format · bioinformatics · dna-methylation · epigenomics · genomics · single-cell
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- Pandoepigenomics · single-cell
Multiome GRN inference.
- DMRichRbioinformatics · dna-methylation
A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methylated regions (DMRs) from CpG count matrices (Bismark cytosine…
- CUT-RUNTools-2.0bioinformatics · genomics · single-cell
CUT&RUN and CUT&Tag data processing and analysis
- octopusbioinformatics · genomics · single-cell
Bayesian haplotype-based mutation calling
- sscClustbioinformatics · genomics · single-cell
simpler single cell RNAseq data clustering
- mgatkgenomics · single-cell
mgatk: mitochondrial genome analysis toolkit
- api.github.com/repos/lhqing/ALLCoolsretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-05-25, 50 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/10.json→ .entries["allcools"]
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