C-VIEW
importedsoftware/c-view
This software implements a high-throughput data processing pipeline to identify and charaterize SARS-CoV-2 variant sequences in specimens from COVID-19 positive hosts or environments.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- ucsd-ccbb
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/ucsd-ccbb/C-VIEW
- Documentation
- unknown
- Tags
- epidemiology · sequencing · viral-genomics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- DRAMviral-genomics
Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes
- vaperviral-genomics
Viral (meta)-genome assembly pipeline.
- GenomicSQLitesequencing
Genomics Extension for SQLite
- harpysequencing
Process linked-read data, from raw sequences to phased haplotypes, batteries included. Works with WGS too!
- hgvssequencing
Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature.org/).
- nRexsequencing
nRex: Germline and somatic single-nucleotide, short indel and structural variant calling
- api.github.com/repos/ucsd-ccbb/C-VIEWretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2023-08-01, 11 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/48.json→ .entries["c-view"]
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