hgvs
importedsoftware/hgvs
Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature.org/).
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- Apache-2.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- biocommons
- Country
- unknown
- Homepage
- hgvs.readthedocs.io/
- Repository
- github.com/biocommons/hgvs
- Documentation
- unknown
- Tags
- bioinformatics · genome-analysis · genomics · hgvs · sequencing · transcript · variant-analysis · variation
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- Genome-on-Dietbioinformatics · genome-analysis · genomics
Genome-on-Diet is a fast and memory-frugal framework for exemplifying sparsified genomics for read mapping, containment search, and metagenomic profiling. It is much faster & more memory-efficient…
- mccortexgenome-analysis · genomics
De novo genome assembly and multisample variant calling
- GenomicSQLitebioinformatics · genomics · sequencing
Genomics Extension for SQLite
- readfishbioinformatics · genomics · sequencing
CLI tool for flexible and fast adaptive sampling on ONT sequencers
- seqfu2bioinformatics · genomics · sequencing
:rocket: seqfu - Sequece Fastx Utilities
- truvaribioinformatics · genomics · sequencing
Structural variant toolkit for VCFs
- api.github.com/repos/biocommons/hgvsretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-07-23, 291 stars, license reported as Apache-2.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/51.json→ .entries["hgvs"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.