mccortex

Category

Software & Systems

Subcategory

unknown

License

MIT(osi)

Status

dormant

Maturity

deployed

Organization

mcveanlab

Country

unknown

Homepage

github.com/mcveanlab/mccortex/wiki

Repository

github.com/mcveanlab/mccortex

Documentation

unknown

Tags

contigs · cortex · de-bruijn-graphs · genome-analysis · genome-assembly · genome-graph · genomics · kmer

Regulatory

unknown

• noporpoise
• rec3141
• fbergroth
• gitter-badger

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

• minigraphgenome-graph · genomics

  Sequence-to-graph mapper and graph generator

• Genome-on-Dietgenome-analysis · genomics

  Genome-on-Diet is a fast and memory-frugal framework for exemplifying sparsified genomics for read mapping, containment search, and metagenomic profiling. It is much faster & more memory-efficient…

• hgvsgenome-analysis · genomics

  Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature.org/).

• smudgeplotgenomics · kmer

  Inference of ploidy and heterozygosity structure using whole genome sequencing data

• tiptoftgenomics · kmer

  Predict plasmids from uncorrected long read data

• wallycontigs · genomics

  Wally: Visualization of aligned sequencing reads and contigs

1. api.github.com/repos/mcveanlab/mccortex
   retrieved 2026-08-05 · via github-api

   Machine-imported from GitHub search. Last push 2019-03-28, 113 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

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/v1/entries/48.json→ .entries["mccortex"]

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