IMCDataAnalysis
importedsoftware/imcdataanalysis
R based workflow for multiplexed imaging data
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- BodenmillerGroup
- Country
- unknown
- Documentation
- unknown
- Tags
- bioconductor · image-analysis · single-cell · spatial-analysis
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- MERINGUEsingle-cell · spatial-analysis
characterizing spatial gene expression heterogeneity in spatially resolved single-cell transcriptomics data with nonuniform cellular densities
- anndata2ribioconductor · single-cell
Convert between AnnData and SingleCellExperiment
- GateLabRbioconductor · single-cell
Interactive flow and mass cytometry gating in R/Shiny on SingleCellExperiment objects, with Gating-ML round-trip. Browser version (no R): github.com/david-priest/GateLab
- CRAWDADspatial-analysis
Cell-type Relationship Analysis Workflow Done Across Distances
- histolyticsspatial-analysis
Interpretable Analysis of Histological WSIs
- artMSbioconductor
Analytical R Tools for Mass Spectrometry
- api.github.com/repos/BodenmillerGroup/IMCDataAnalysisretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-03-20, 40 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/18.json→ .entries["imcdataanalysis"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.