MERINGUE

Category

Software & Systems

Subcategory

unknown

License

GPL-3.0(osi)

Status

active

Maturity

deployed

Organization

JEFworks-Lab

Country

unknown

Homepage

jef.works/MERINGUE

Repository

github.com/JEFworks-Lab/MERINGUE

Documentation

unknown

Tags

cell-cell-communication · gene-expression · rstats · single-cell · spatial-analysis · spatial-transcriptomics

Regulatory

unknown

• JEFworks
• bmill3r

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

• SpaTalkcell-cell-communication · single-cell · spatial-transcriptomics

  Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data

• IMCDataAnalysissingle-cell · spatial-analysis

  R based workflow for multiplexed imaging data

• CrossTalkeRcell-cell-communication · single-cell

  R package to do the Ligand Receptor Analysis Visualization

• liana-pycell-cell-communication · single-cell

  LIANA+: an all-in-one framework for cell-cell communication

• COSGsingle-cell · spatial-transcriptomics

  Accurate and fast cell marker gene identification with COSG

• OmicsClawsingle-cell · spatial-transcriptomics

  Conversational & memory-enabled AI research partner for multi-omics analysis. CLI + Desktop App (installers in Releases). From biological idea to full research paper.

1. api.github.com/repos/JEFworks-Lab/MERINGUE
   retrieved 2026-08-05 · via github-api

   Machine-imported from GitHub search. Last push 2026-04-30, 98 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

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/v1/entries/35.json→ .entries["meringue"]

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