indigo
importedsoftware/indigo-gear-genomics
Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- gear-genomics
- Country
- unknown
- Homepage
- www.gear-genomics.com/indigo/
- Repository
- github.com/gear-genomics/indigo
- Documentation
- unknown
- Tags
- alignment · alleles · chromatogram-traces · crispr-analysis · crispr-cas9 · gear-genomics · indel-discovery · indels
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- tracyalignment · crispr-analysis · crispr-cas9 · indel-discovery
Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files
- verdingear-genomics
Variant Primer Design
- snippyindel-discovery
:scissors: :zap: Rapid haploid variant calling and core genome alignment
- cievadindels
A tool suite for a simple, streamlined and rapid evaluation of variant callsets
- ClairSindels
ClairS: a deep-learning method for long-read tumor–normal pair somatic small variant calling
- ScanNeo2indels
Snakemake-based computational workflow for neoantigen prediction from diverse sources
- api.github.com/repos/gear-genomics/indigoretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-07-21, 37 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/59.json→ .entries["indigo-gear-genomics"]
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