snippy
importedsoftware/snippy
:scissors: :zap: Rapid haploid variant calling and core genome alignment
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-2.0(osi)
- Status
- maintained
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/tseemann/snippy
- Documentation
- unknown
- Tags
- bacteria · bioinformatics · fastq-analysis · genomics · haploid · indel-discovery · snps · variant-calling
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- snpkitbacteria · genomics · snps · variant-calling
Modular workflow for Microbial Variant Calling and SNP diagnostics.
- snp-placerbioinformatics · snps · variant-calling
Take information about snps on short sequence reads and accurately place the snps in a reference genome
- cievadbioinformatics · genomics · snps
A tool suite for a simple, streamlined and rapid evaluation of variant callsets
- NanoVarBenchbacteria · bioinformatics · variant-calling
Evaluating Nanopore-based bacterial variant calling
- chewBBACAbacteria · bioinformatics · genomics
BSR-Based Allele Calling Algorithm
- indigoindel-discovery
Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products
- api.github.com/repos/tseemann/snippyretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2025-12-12, 594 stars, license reported as GPL-2.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/2.json→ .entries["snippy"]
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