nallo
importedsoftware/nallo
An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- genomic-medicine-sweden
- Country
- unknown
- Repository
- github.com/genomic-medicine-sweden/nallo
- Documentation
- unknown
- Tags
- gms · long-read-sequencing · nanopore · pacbio · variant-calling
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- Clair3-RNAlong-read-sequencing · nanopore
Clair3-RNA - a long-read small variant caller for RNA sequencing data
- ClairS-TOlong-read-sequencing · nanopore
ClairS-TO - a deep-learning method for tumor-only somatic variant calling
- maglong-read-sequencing · nanopore
Assembly and binning of metagenomes
- scnanoseqlong-read-sequencing · nanopore
Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics
- ccspacbio · variant-calling
CCS: Generate Highly Accurate Single-Molecule Consensus Reads (HiFi Reads)
- pacvarpacbio · variant-calling
Longread PacBio sequencing processing for WGS and PureTarget
- api.github.com/repos/genomic-medicine-sweden/nalloretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-05, 70 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/5.json→ .entries["nallo"]
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