ccs

Category

Software & Systems

Subcategory

unknown

License

BSD-3-Clause-Clear(osi)

Status

dormant

Maturity

deployed

Organization

PacificBiosciences

Country

unknown

Homepage

unknown

Repository

github.com/PacificBiosciences/ccs

Documentation

unknown

Tags

bioinformatics · ccs · consensus · machine-learning · pacbio · variant-calling

Regulatory

unknown

• nlhepler
• armintoepfer
• dalexander
• evolvedmicrobe
• pb-dseifert
• bnbowman

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

• ococobioinformatics · consensus · variant-calling

  Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.

• covid19consensus · variant-calling

  SARS-CoV-2 analysis pipeline for short-read, paired-end illumina sequencing

• nallopacbio · variant-calling

  An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.

• pacvarpacbio · variant-calling

  Longread PacBio sequencing processing for WGS and PureTarget

• ionmobccs

  An open-source prediction framework for peptide ion collision cross section (CCS) values with python.

• hifiasmbioinformatics · pacbio

  Hifiasm: a haplotype-resolved assembler for accurate Hifi reads

1. api.github.com/repos/PacificBiosciences/ccs
   retrieved 2026-08-05 · via github-api

   Machine-imported from GitHub search. Last push 2024-03-18, 127 stars, license reported as BSD-3-Clause-Clear. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

/v1/entries/48.json→ .entries["ccs"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.