rna-seq-pop
importedsoftware/rna-seq-pop
Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Repository
- github.com/sanjaynagi/rna-seq-pop
- Documentation
- unknown
- Tags
- ancestry · differential-expression · genomic-surveillance · karyotype · population-genetics · population-genomics · rna-seq · selection
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- PopDelpopulation-genomics
Population-wide Deletion Calling
- PyDESeq2differential-expression · rna-seq
A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.
- peddyancestry
genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF
- Personal-Genome-Pipelineancestry
Whole genome sequencing analysis pipeline for consumer hardware. 100% local, Docker-powered, free and open source.
- BaseVarCpopulation-genetics
The repo was not under active development. Check out angsd toolkit for low depth data analyses.
- ClawBiopopulation-genetics
🦖 ClawBio - The first bioinformatics-native AI agent skill library. Local-first. Reproducible. Open. Free.
- api.github.com/repos/sanjaynagi/rna-seq-popretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-02-17, 18 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/52.json→ .entries["rna-seq-pop"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.