PyDESeq2
importedsoftware/pydeseq2
A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- scverse
- Country
- unknown
- Repository
- github.com/scverse/PyDESeq2
- Documentation
- unknown
- Tags
- bioinformatics · differential-expression · python · rna-seq · transcriptomics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- SCPAdifferential-expression · transcriptomics
R package for pathway analysis in scRNA-seq data
- rna-seq-popdifferential-expression · rna-seq
Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
- alevin-fryrna-seq · transcriptomics
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
- anndatabioinformatics · transcriptomics
Annotated data.
- bacnetbioinformatics · transcriptomics
BACNET is a Java based platform to develop website for multi-omics analysis
- DRVIbioinformatics · transcriptomics
Unsupervised Deep Disentangled Representation of Single-Cell Omics
- api.github.com/repos/scverse/PyDESeq2retrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-03, 760 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/26.json→ .entries["pydeseq2"]
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