single-cell-pseudotime
importedsoftware/single-cell-pseudotime
An overview of algorithms for estimating pseudotime in single-cell RNA-seq data
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- CC-BY-4.0(cc)
- Status
- active
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Documentation
- unknown
- Tags
- bioinformatics · pseudotime-algorithms · rna-seq · single-cell
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- CCSinglecellbioinformatics · rna-seq · single-cell
A project focused on using single-cell RNA sequencing data (scRNA-seq) and pseudo time to improve colon cancer diagnosis and outcomes.
- kanabioinformatics · rna-seq · single-cell
Single cell analysis in the browser
- NGSbioinformatics · rna-seq · single-cell
Next-Gen Sequencing tools from the Horvath Lab
- single-cell-trainingbioinformatics · rna-seq · single-cell
SIB course on single cell transcriptomics by mostly using the Seurat pipeline
- scDatasetbioinformatics · rna-seq · single-cell
scDataset: Scalable Data Loading for Deep Learning on Large-Scale Single-Cell Omics
- alevin-fryrna-seq · single-cell
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
- api.github.com/repos/agitter/single-cell-pseudotimeretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-07-28, 444 stars, license reported as CC-BY-4.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
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/v1/entries/32.json→ .entries["single-cell-pseudotime"]
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