alevin-fry
importedsoftware/alevin-fry
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- BSD-3-Clause(osi)
- Status
- active
- Maturity
- deployed
- Organization
- COMBINE-lab
- Country
- unknown
- Homepage
- alevin-fry.readthedocs.io
- Repository
- github.com/COMBINE-lab/alevin-fry
- Documentation
- unknown
- Tags
- 10x · quantification · rna-seq · rust · single-cell · single-cell-rna-seq · transcriptomics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- SCPAsingle-cell · single-cell-rna-seq · transcriptomics
R package for pathway analysis in scRNA-seq data
- dittoSeqrna-seq · single-cell · single-cell-rna-seq
Color blindness friendly visualization of single-cell and bulk RNA-sequencing data
- scRNA-toolsrna-seq · single-cell · single-cell-rna-seq
Table of software for the analysis of single-cell RNA-seq data.
- cirrocumulus10x · single-cell
Bring your single-cell data to life
- CITE-seq-Count10x · single-cell
A tool that allows to get UMI counts from a single cell protein assay
- salmonquantification · rna-seq
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
- api.github.com/repos/COMBINE-lab/alevin-fryretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-07-10, 214 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/6.json→ .entries["alevin-fry"]
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