viralrecon
importedsoftware/viralrecon
Assembly and intrahost/low-frequency variant calling for viral samples
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- nf-core
- Country
- unknown
- Homepage
- nf-co.re/viralrecon
- Repository
- github.com/nf-core/viralrecon
- Documentation
- unknown
- Tags
- amplicon · artic · assembly · covid-19 · covid19 · illumina · long-read-sequencing · metagenomics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- magassembly · long-read-sequencing · metagenomics
Assembly and binning of metagenomes
- dada2amplicon · metagenomics
Accurate sample inference from amplicon data with single nucleotide resolution
- ClairSillumina · long-read-sequencing
ClairS: a deep-learning method for long-read tumor–normal pair somatic small variant calling
- ClairS-TOillumina · long-read-sequencing
ClairS-TO - a deep-learning method for tumor-only somatic variant calling
- WGS-Analysis-VariantCallingassembly · illumina
Nextflow pipeline for whole-genome sequencing (WGS) analysis and variant calling in bacterial genomes using Illumina data, supporting de novo assembly and reference-based analysis.
- metagraphassembly · metagenomics
Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly
- api.github.com/repos/nf-core/viralreconretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-03, 165 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/38.json→ .entries["viralrecon"]
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