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CITE-seq-Count

imported

software/cite-seq-count

A tool that allows to get UMI counts from a single cell protein assay

Machine-generated from the listed sources and not yet reviewed by a human.

record
Category
Software & Systems
Subcategory
unknown
License
MIT(osi)
Status
maintained
Maturity
deployed
Organization
unknown
Country
unknown
Documentation
unknown
Tags
10x · citeseq · dropseq · single-cell
Regulatory
unknown
built by · 6

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • alevin-fry10x · single-cell

    🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.

  • cirrocumulus10x · single-cell

    Bring your single-cell data to life

  • ALLCoolssingle-cell

    Toolkit for single-cell DNA methylation analysis.

  • anndata2risingle-cell

    Convert between AnnData and SingleCellExperiment

  • annsqlsingle-cell

    The AnnSQL package enables SQL based queries on AnnData objects.

  • briesingle-cell

    BRIE: Bayesian Regression for Isoform Estimate in Single Cells

sources
  1. api.github.com/repos/Hoohm/CITE-seq-Count
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2025-04-23, 88 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/46.json→ .entries["cite-seq-count"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.