cellsnp-lite
importedsoftware/cellsnp-lite
Efficient genotyping bi-allelic SNPs on single cells
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- Apache-2.0(osi)
- Status
- maintained
- Maturity
- deployed
- Organization
- single-cell-genetics
- Country
- unknown
- Homepage
- cellsnp-lite.readthedocs.io
- Documentation
- unknown
- Tags
- genetic-variants · genotyping · single-cell
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- cellSNPgenetic-variants · genotyping · single-cell
Pileup biallelic SNPs from single-cell and bulk RNA-seq data
- echtvargenetic-variants
using all the bits for echt rapid variant annotation and filtering
- GeneticThesaurusgenetic-variants
Thesaurus for genetic variants
- Amiragenotyping
A tool to detect acquired AMR genes directly from long read sequencing data.
- bassetgenotyping
Nextflow pipeline for species-specific typing of bacteria
- EcoliTypergenotyping
EcoliTyper: A species-optimized computational pipeline for comprehensive genotyping and surveillance of Escherichia coli. Perfect for clinical microbiology, outbreak investigations, and genomic…
- api.github.com/repos/single-cell-genetics/cellsnp-literetrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2025-10-30, 165 stars, license reported as Apache-2.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/55.json→ .entries["cellsnp-lite"]
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