hts-nim

Category

Software & Systems

Subcategory

unknown

License

MIT(osi)

Status

active

Maturity

deployed

Organization

unknown

Country

unknown

Homepage

brentp.github.io/hts-nim/

Repository

github.com/brentp/hts-nim

Documentation

unknown

Tags

bioinformatics · genomics · high-throughput-sequencing · htslib · nim · nim-lang

Regulatory

unknown

• brentp
• xbello
• ernfrid
• ringabout
• narimiran
• kojix2

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

• cyvcf2bioinformatics · genomics · htslib

  cython + htslib == fast VCF and BCF processing

• indelopegenomics · nim-lang

  find large indels (in the blind spot between GATK/freebayes and SV callers)

• pysambioinformatics · htslib

  Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers…

• generative-virtual-screeningnim

  NVIDIA BioNeMo blueprint for generative AI-based virtual screening

• adambioinformatics · genomics

  ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

• aiolibioinformatics · genomics

  Framework for building fast genomics web tools with WebAssembly and WebWorkers

1. api.github.com/repos/brentp/hts-nim
   retrieved 2026-08-05 · via github-api

   Machine-imported from GitHub search. Last push 2026-05-02, 158 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

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