indelope
importedsoftware/indelope
find large indels (in the blind spot between GATK/freebayes and SV callers)
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/brentp/indelope
- Documentation
- unknown
- Tags
- genome-assembly · genomics · k-mer-counting · local-assembly · nim-lang · variant-calling · vcf
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- hts-nimgenomics · nim-lang
nim wrapper for htslib for parsing genomics data files
- kmer-cntgenomics · k-mer-counting
Code examples of fast and simple k-mer counters for tutorial purposes
- snpkitgenomics · variant-calling · vcf
Modular workflow for Microbial Variant Calling and SNP diagnostics.
- vcfdistgenomics · variant-calling · vcf
vcfdist: Accurately benchmarking phased variant calls
- vcfkitgenomics · variant-calling · vcf
Fast VCF toolkit — normalize, liftover, filter — as a single static binary. 4× faster than bcftools on hot paths. No htslib, no Python, no C dependencies.
- mccortexgenome-assembly · genomics
De novo genome assembly and multisample variant calling
- api.github.com/repos/brentp/indeloperetrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2017-12-03, 39 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/39.json→ .entries["indelope"]
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