NanoVarBench
importedsoftware/nanovarbench
Evaluating Nanopore-based bacterial variant calling
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- maintained
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Repository
- github.com/mbhall88/NanoVarBench
- Documentation
- unknown
- Tags
- bacteria · benchmark · bioinformatics · illumina · microbial-genomics · nanopore · variant-calling
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- ClairS-TObioinformatics · illumina · nanopore
ClairS-TO - a deep-learning method for tumor-only somatic variant calling
- baktabacteria · bioinformatics · microbial-genomics
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
- nf-ncov-vocbioinformatics · microbial-genomics · variant-calling
A Nextflow wrapped workflow for generating the mutation profiles of SARS-CoV-2 or Mpox genomes. Workflow is developed in collaboration with VIRUS-MVP (https://github.com/cidgoh/VIRUS-MVP) which can…
- tbporebioinformatics · nanopore · variant-calling
Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data
- snippybacteria · bioinformatics · variant-calling
:scissors: :zap: Rapid haploid variant calling and core genome alignment
- WGS-Analysis-VariantCallingillumina · variant-calling
Nextflow pipeline for whole-genome sequencing (WGS) analysis and variant calling in bacterial genomes using Illumina data, supporting de novo assembly and reference-based analysis.
- api.github.com/repos/mbhall88/NanoVarBenchretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2025-07-23, 23 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/58.json→ .entries["nanovarbench"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.