SKA
importedsoftware/ska
Split Kmer Analysis
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/simonrharris/SKA
- Documentation
- unknown
- Tags
- bacterial-genomes · epidemiology · genomics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- PhyloTracebacterial-genomes · epidemiology
PhyloTrace is a GUI platform for bacterial monitoring offering a toolkit of analyses like hashed cgMLST typing and Antimicrobial Resistance Screening.
- baktabacterial-genomes
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
- SNPBacbacterial-genomes
SNP and variant calling pipeline for bacteria
- WGS-Analysis-VariantCallingbacterial-genomes
Nextflow pipeline for whole-genome sequencing (WGS) analysis and variant calling in bacterial genomes using Illumina data, supporting de novo assembly and reference-based analysis.
- cov-spectrum-websiteepidemiology · genomics
A web platform to detect and analyze variants of SARS-CoV-2
- LAPISepidemiology · genomics
An API, a query engine, and a database schema for genomic sequences; currently with a focus on SARS-CoV-2
- api.github.com/repos/simonrharris/SKAretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2022-05-26, 67 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/30.json→ .entries["ska"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.