V-pipe
importedsoftware/v-pipe
V-pipe is a pipeline designed for analysing NGS data of short viral genomes
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- Apache-2.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- cbg-ethz
- Country
- unknown
- Homepage
- cbg-ethz.github.io/V-pipe/
- Repository
- github.com/cbg-ethz/V-pipe
- Documentation
- unknown
- Tags
- biohackcovid20 · biohackeu20 · biohackeu21 · biohackeu22 · bioinformatics · bioinformatics-pipeline · conda · genomics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- sarekbioinformatics · conda · genomics
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
- snakemake-ont-bacterial-variantsbioinformatics-pipeline · conda
A Snakemake workflow for the identification of variants in bacterial genomes using nanopore long-read sequencing.
- albatradisbioinformatics · bioinformatics-pipeline · genomics
Comparative TraDIS analysis
- czid-webbioinformatics · bioinformatics-pipeline · genomics
Infectious Disease Sequencing Platform
- gcp-for-bioinformaticsbioinformatics · bioinformatics-pipeline · genomics
GCP for Bioinformatics Researchers
- gubbinsbioinformatics · bioinformatics-pipeline · genomics
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
- api.github.com/repos/cbg-ethz/V-piperetrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-02, 149 stars, license reported as Apache-2.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/16.json→ .entries["v-pipe"]
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