ococo

Category

Software & Systems

Subcategory

unknown

License

MIT(osi)

Status

dormant

Maturity

deployed

Organization

unknown

Country

unknown

Homepage

arxiv.org/abs/1712.01146

Repository

github.com/karel-brinda/ococo

Documentation

unknown

Tags

bioinformatics · consensus · ngs · online-algorithms · variant-calling

Regulatory

unknown

• karel-brinda

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

• ccsbioinformatics · consensus · variant-calling

  CCS: Generate Highly Accurate Single-Molecule Consensus Reads (HiFi Reads)

• covid19consensus · variant-calling

  SARS-CoV-2 analysis pipeline for short-read, paired-end illumina sequencing

• CalliNGS-NFbioinformatics · ngs · variant-calling

  GATK RNA-Seq Variant Calling in Nextflow

• Exome-Analysis-End-to-ENDbioinformatics · ngs · variant-calling

  Automated end to end NGS exome analysis pipeline. One command from FASTQ to fully annotated variants with QC, alignment, GATK calling, ANNOVAR and snpEff annotation, functional classification, and…

• GermlineEnrichmentbioinformatics · ngs · variant-calling

  Variant calling pipeline for germline enrichment NGS data

• snakemake-illumina-gatkvariantbioinformatics · ngs · variant-calling

  A Snakemake workflow for variant calling using GATK4 best practices

1. api.github.com/repos/karel-brinda/ococo
   retrieved 2026-08-05 · via github-api

   Machine-imported from GitHub search. Last push 2019-01-18, 46 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

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/v1/entries/42.json→ .entries["ococo"]

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