Exome-Analysis-End-to-END
importedsoftware/exome-analysis-end-to-end
Automated end to end NGS exome analysis pipeline. One command from FASTQ to fully annotated variants with QC, alignment, GATK calling, ANNOVAR and snpEff annotation, functional classification, and…
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- maintained
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Documentation
- unknown
- Tags
- bioinformatics · exome · exome-analysis · genetics · ngs · variant-calling
- Regulatory
- unknown
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- CalliNGS-NFbioinformatics · ngs · variant-calling
GATK RNA-Seq Variant Calling in Nextflow
- GermlineEnrichmentbioinformatics · ngs · variant-calling
Variant calling pipeline for germline enrichment NGS data
- ococobioinformatics · ngs · variant-calling
Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.
- Exomiserexome
A Tool to Annotate and Prioritize Exome Variants
- GeneticThesaurusgenetics · variant-calling
Thesaurus for genetic variants
- snakemake-illumina-gatkvariantbioinformatics · ngs · variant-calling
A Snakemake workflow for variant calling using GATK4 best practices
- api.github.com/repos/Babajan-B/Exome-Analysis-End-to-ENDretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2025-11-21, 6 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/50.json→ .entries["exome-analysis-end-to-end"]
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