GermlineEnrichment

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software/germlineenrichment

Variant calling pipeline for germline enrichment NGS data

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similar by tags

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End-to-end somatic and germline variant calling pipeline using BWA, GATK HaplotypeCaller, VEP and ANNOVAR for tumor NGS analysis
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Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical biologists and wet-lab personnel to do metagenomics/viromics…
Exome-Analysis-End-to-ENDbioinformatics · ngs · variant-calling
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Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.

sources

api.github.com/repos/mcgml/GermlineEnrichment
retrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2022-10-05, 4 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

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