kaiju
importedsoftware/kaiju
Fast taxonomic classification of metagenomic sequencing reads using a protein reference database
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- bioinformatics-centre
- Country
- unknown
- Homepage
- kaiju.binf.ku.dk
- Repository
- github.com/bioinformatics-centre/kaiju
- Documentation
- unknown
- Tags
- bioinformatics · metagenomics · next-generation-sequencing · taxonomic-classification · taxonomy
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- dada2bioinformatics · metagenomics · taxonomy
Accurate sample inference from amplicon data with single nucleotide resolution
- GTDBTkbioinformatics · metagenomics · taxonomy
GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.
- albatradisbioinformatics · next-generation-sequencing
Comparative TraDIS analysis
- gubbinsbioinformatics · next-generation-sequencing
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
- lodestonebioinformatics · next-generation-sequencing
Mycobacterial pipeline
- taxonkitbioinformatics · taxonomy
A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV
- api.github.com/repos/bioinformatics-centre/kaijuretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-06-09, 305 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/41.json→ .entries["kaiju"]
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