picovcf

Category

Software & Systems

Subcategory

unknown

License

MIT(osi)

Status

maintained

Maturity

deployed

Organization

aprilweilab

Country

unknown

Homepage

picovcf.readthedocs.io/

Repository

github.com/aprilweilab/picovcf

Documentation

unknown

Tags

c-plus-plus · comp-bio · header-only · header-only-library · variant-calling · vcf

Regulatory

unknown

• dcdehaas
• dcdatcu

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

• pyigdcomp-bio · variant-calling

  Python-only parser for Indexable Genotype Data (IGD) format.

• indelopevariant-calling · vcf

  find large indels (in the blind spot between GATK/freebayes and SV callers)

• snpkitvariant-calling · vcf

  Modular workflow for Microbial Variant Calling and SNP diagnostics.

• variant-extractorvariant-calling · vcf

  Deterministic and standard extractor of SNVs, indels and structural variants (SVs) from VCF files.

• vcfdistvariant-calling · vcf

  vcfdist: Accurately benchmarking phased variant calls

• vcfkitvariant-calling · vcf

  Fast VCF toolkit — normalize, liftover, filter — as a single static binary. 4× faster than bcftools on hot paths. No htslib, no Python, no C dependencies.

1. api.github.com/repos/aprilweilab/picovcf
   retrieved 2026-08-05 · via github-api

   Machine-imported from GitHub search. Last push 2025-12-02, 23 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

/v1/entries/11.json→ .entries["picovcf"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.