Monopogen
importedsoftware/monopogen
SNV calling from single cell sequencing
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- KChen-lab
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/KChen-lab/Monopogen
- Documentation
- unknown
- Tags
- germline-variants · single-cell · snvs · somatic-variants
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- octopussingle-cell · somatic-variants
Bayesian haplotype-based mutation calling
- CANCER_VAR_CALLsomatic-variants
End-to-end somatic and germline variant calling pipeline using BWA, GATK HaplotypeCaller, VEP and ANNOVAR for tumor NGS analysis
- nRexsomatic-variants
nRex: Germline and somatic single-nucleotide, short indel and structural variant calling
- alevin-frysingle-cell
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
- ALLCoolssingle-cell
Toolkit for single-cell DNA methylation analysis.
- anndata2risingle-cell
Convert between AnnData and SingleCellExperiment
- api.github.com/repos/KChen-lab/Monopogenretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2024-11-11, 120 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/15.json→ .entries["monopogen"]
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